NiMARE: Neuroimaging Meta-Analysis Research Environment

NiMARE is a Python package for neuroimaging meta-analyses. It makes conducting scary meta-analyses a dream!

To install NiMARE check out our installation guide.

Contents:

• About NiMARE
  • NiMARE’s Scope and Roadmap
  • NiMARE’s Role in a Proposed Meta-Analytic Ecosystem
• Installation
  • What Next?
• API
  • nimare.dataset: Dataset IO
  • nimare.meta: Meta-analytic algorithms
  • nimare.results: Meta-analytic results
  • nimare.correct: Multiple comparisons correction
  • nimare.diagnostics: Diagnostics
  • nimare.annotate: Automated annotation
  • nimare.decode: Functional characterization analysis
  • nimare.io: Tools for ingesting data in other formats
  • nimare.transforms: Data transforms
  • nimare.extract: Dataset and model fetching
  • nimare.stats: Statistical functions
  • nimare.generate: Data generation functions
  • nimare.utils: Utility functions and submodules
  • nimare.workflows: Common workflows
  • nimare.base: Base classes
• Examples
  • Working with datasets
  • Performing meta-analyses
  • Automated annotation
  • Functional characterization analysis
• Contributing to NiMARE
  • Governance
  • Code of conduct
  • Asking questions about using NiMARE
  • Labels
  • Making a change
  • Recognizing contributions
  • Thank you!
• NiMARE Developer Guide
  • Coding Style
  • Installation with Docker
• Command Line Interface
  • Sub-commands:
• Outputs of NiMARE
  • File names
  • File contents
• NiMARE Methods
  • Coordinate-based meta-analysis in NiMARE
  • Meta-analytic functional decoding
  • Fetching resources from the internet

Indices and tables

• Index

• Module Index

• Search Page