nimare.annotate.text.download_abstracts

download_abstracts(dataset, email)

Download the abstracts for a list of PubMed IDs. Uses the BioPython package.

Parameters:

• dataset (nimare.dataset.Dataset or list of str) – A Dataset object where IDs are in the form PMID-EXPID or a list of PubMed IDs
• email (str) – Email address to use to call the PubMed API

Returns:

dataset – Dataset with abstracts added.

Return type:

nimare.dataset.Dataset or list of str